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  • read density (Chip-seq data)

    Hey there,
    I already read numerous papers where the term "read density" appeared. But they never explain what this means :evil:
    Often in the context of Chip-seq. For example: Quantitative read density analysis of H3K27ac Chip-seq data...

    I hope you can help me

  • #2
    "Alignment Dichte", to make up a phrase in quasi-German. The reads/alignments are from the sequencing data, the density simply refers to how many are in a particular area. In this case, it's presumably talking about how many reads/alignments happen to be inside of peaks in ChIPseq data.

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