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Old 02-14-2011, 08:48 AM   #1
Location: Brazil

Join Date: Aug 2010
Posts: 47
Default Nexgen simulator.


Is there any software that simulates the large-scale sequencing generated by Solexa and SOLiD platforms? I have some genomes and wanted to test some assemblers to observe their performance and need a program that shred the genome into small fragments with a certain coverage.

Best regards,
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Old 02-14-2011, 08:57 AM   #2
Location: Cambridge

Join Date: Feb 2009
Posts: 22

I have found the SimSeq simulator to be quite useful:
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