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Old 08-25-2015, 11:36 AM   #1
satishg
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Smile Sorting Amino Acid Sequences

I have a a set of three fasta files with amino acid sequences. Can you suggest me scripts to separate out sequences that are common, and as well that are different among each of the three fasta files?

Last edited by satishg; 08-25-2015 at 11:39 AM.
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Old 08-25-2015, 11:49 AM   #2
GenoMax
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Look into CD-HIT (http://weizhongli-lab.org/cdhit_suite/cgi-bin/index.cgi). Depending on how large your files are you may need to contact the lab.
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Old 08-25-2015, 12:02 PM   #3
satishg
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Thanks ! I was able to install it locally. I will explore it.
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