I am just after processing 24 files, using trimmomatic to quality filter them. On average was 30% of the reads were bad quality (SD = 11).
This seems somewhat high to me, I was just wondering if anyone else had experience with this and could tell me what would be expected? If I should be particularly concerned about this...
Thanks.
This seems somewhat high to me, I was just wondering if anyone else had experience with this and could tell me what would be expected? If I should be particularly concerned about this...
Thanks.
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