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Old 12-06-2012, 03:07 AM   #1
Location: Europe

Join Date: Sep 2011
Posts: 16
Default edgeR plotting error


I am analyzing count data from RNAseq and, while I can properly run the differential expression analysis, the plotSmear function fails with the warning

" Error in log2(x) : Non-numeric argument to mathematical function "

but when I try to convert the file to make it numeric, I'm told the following

" Error in lapply(X = X, FUN = FUN, ...) :
(list) object cannot be coerced to type 'double' "

Any help would be appreciated.
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