Hi,
I am using STAR to align my RNAseq reads and I realize that the parameters for looking for miRNAs (or other short RNAs) are very different than those for aligning mRNAs (especially splicing). Is there a way to accomplish both or should I analyze each file twice?
Thanks,
Danielle
I am using STAR to align my RNAseq reads and I realize that the parameters for looking for miRNAs (or other short RNAs) are very different than those for aligning mRNAs (especially splicing). Is there a way to accomplish both or should I analyze each file twice?
Thanks,
Danielle