Hello,
We are doing differential analysis (DE) in DeSeq for different H.pylori strains. We are not able to find the gff3 files for those H.pylori strains (98-10, 35A, 51, 52, F16, F30, F32, F57) to use in htseq-count.
Perhaps you will know where I can download those gff3 files? The fasta files can be downloaded from NCBI, but not the gff3 ones.
Thanks
We are doing differential analysis (DE) in DeSeq for different H.pylori strains. We are not able to find the gff3 files for those H.pylori strains (98-10, 35A, 51, 52, F16, F30, F32, F57) to use in htseq-count.
Perhaps you will know where I can download those gff3 files? The fasta files can be downloaded from NCBI, but not the gff3 ones.
Thanks
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