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Protein ID that blast could not identify Tsuyoshi Bioinformatics 11 09-10-2012 03:22 AM

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Old 04-12-2017, 05:20 AM   #1
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Location: Czech Republic

Join Date: Aug 2016
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Default How to identify protein isoforms

Hi all,

I have set of proteins (peptidases) downloaded from NCBI. I'm not sure if some of them are coded by different genes or they are different splice variants from same gene. I have reference genome, so it wouldn't be so hard to determine it by mapping to reference. Please do you have some tools/wokflows/scripts how to proceed?

Thanks in advance

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