Need a pointer to a dataset with matching animal+human for two different tissues

fuellen · 08-03-2018, 01:57 AM

Hello,
is anyone aware of publicly available data with at least 8 samples describing gene expression as follows, each time for 2 conditions, so that logFC can be calculated each time:
+ tissue1 for human
+ tissue2 for human
+ tissue1 for some animal
+ tissue2 for some animal
Would be great to have biological replicates, would be nice if animal is mouse and tissue2 is blood.
The 2 conditions could be young/old, healthy/diseased, male/female, or similar. RNA-seq preferred, microarray data ok if need be.
many thanks!
georg

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08-03-2018, 01:57 AM	#1
fuellen Junior Member Location: Germany Join Date: Jan 2018 Posts: 8	Need a pointer to a dataset with matching animal+human for two different tissues Hello, is anyone aware of publicly available data with at least 8 samples describing gene expression as follows, each time for 2 conditions, so that logFC can be calculated each time: + tissue1 for human + tissue2 for human + tissue1 for some animal + tissue2 for some animal Would be great to have biological replicates, would be nice if animal is mouse and tissue2 is blood. The 2 conditions could be young/old, healthy/diseased, male/female, or similar. RNA-seq preferred, microarray data ok if need be. many thanks! georg Last edited by fuellen; 08-03-2018 at 06:54 AM. Reason: Added one further constraint: logFC needed...