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Old 01-14-2016, 08:34 AM   #1
kopardev
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Default FASTQ read filtering/trimming/subsets ... a new approach

Please try MEEPTOOLS and post your comments on how we can improve it.
Thanks.

https://github.com/nisheth/meeptools
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Old 01-15-2016, 04:53 AM   #2
sklages
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Any description on how the algorithm is working?
What are the advantages over average phred scores?
Did you compare speed and results (accuray etc) with other already existing programs to get a rough idea about meeptools performance?

best,
Sven
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Old 01-15-2016, 05:31 AM   #3
kopardev
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Thank you Sven for your questions. These are all interesting questions. Our manuscript is available at arxiv for download. I believe this will answer all your questions. I encourage you to download it and skim through. If you have further questions, I will be happy to answer them. Have a nice day.

http://arxiv.org/pdf/1512.03344v1.pdf
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Old 01-17-2016, 10:26 PM   #4
sklages
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Thanks for the link.
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