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  • Velvet -output format

    Dear friends,

    I have recently started using velvet. On running velveth i get two files Roadmap and Sequences. Can anybody tell me what the internal structure of these file format means, especially the Roadmap file where you get the output:
    ROADMAP 301
    45 12 6 8
    -1 12 0 -1
    -1 12 0 -1

    Thanks in advance

    Ratnesh

  • #2
    I would also like to know this.

    And also, if anyone could tell me how to run velvet on illumina's paired-end bustard qseq.txt files that would be great.
    Last edited by Awesome; 07-28-2010, 10:09 AM.

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