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Old 01-16-2014, 04:07 PM   #1
cmtmaciel
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Location: Brasil

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Default Singletons, unique genes... outputs from velvet

Hi,
I have used the Velvet and Oases for alignment of the raw reads, however, I couldn't find in the output files some important data, such as the number of unique genes, singletons, redundancy and the coverage. So, I would like to know if the program velvet or Oases have those information in the output pool. Thanks.
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Old 01-17-2014, 12:43 AM   #2
TiborNagy
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Velvet produces a stats.txt output file. This contains coverage information, but I do not have information about the other important data.
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