Hey,
Am new here, so i think its appropriate to say a humble hallo..
secondly, am also new to bioinformatics but i have managed to do some analysis in the past few weeks. my main aim was to compair two groups of patients to determine genes which were differentially expressed from the two groups. i did the analysis on Pertek and also on R/Bioconductor.
am however observing something wierd; the results are not comparable. I'm getting more genes when using the commercial software compared to when i use R/bioconductor.
Can someone give me a heads up on what might be going on here..
Am new here, so i think its appropriate to say a humble hallo..
secondly, am also new to bioinformatics but i have managed to do some analysis in the past few weeks. my main aim was to compair two groups of patients to determine genes which were differentially expressed from the two groups. i did the analysis on Pertek and also on R/Bioconductor.
am however observing something wierd; the results are not comparable. I'm getting more genes when using the commercial software compared to when i use R/bioconductor.
Can someone give me a heads up on what might be going on here..
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