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  • Cheapest cell lysate --> mRNA strategy

    Hi,

    Can anyone fill me in on the most cost-effective strategy from going from cell lysates to mRNA, either directly or indirectly? Currently, my lab is:
    1) taking cell lysates and isolating total RNA (Qiagen RNeasy mini kit with Qia on-column DNase treatment)
    2) running a gel to visualize RNA integrity
    3) quantifying total RNA (Qubit) for steps 4 and 5
    4) ERCC spike-in
    5) Dynabead mRNA purification

    With the RNeasy kit and the Dynabeads, there's a lot of money going in, especially with the RNeasy columns, which are not reusable.

    Do you have any recommendations for alternative strategies?

  • #2
    Why not use dynabeads directly? They (Invitrogen/Ambion/Life/thermo or whatever they are called now) have a mRNA direct kit that is much cheaper than buying beads only.

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