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  • #1

    glimmer3 output

    Currently I am setting up DIYA and I experienced some small problems with glimmer. I managed to install tigr-glimmer on ubuntu 12.10. Currently using g3-from-scratch.diya.csh to find ORF and now I am planning to identify them.

    The question is, as I end up with a bunch of files I assume that I need *.detail or *.predict. Is there a way that glimmer can export the fasta input file as something like a genbank file? That I can run analysis applications on the gbk?

    Maybe it is just to early...

    tigr-glimmer extract 007/007.fasta.convert 007/008.predict

    Creates a nice mFASTA file
    Last edited by jjk; 11-16-2012, 12:01 AM.
    Tags: diya, glimmer
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