Hi all,
I'm new to the forum and working on comparative genomics.
I'm comparing around 50 bacterial genomes, most of which contain palsmid and few doesn't.
I would like to know, when i calculate average nucleotide identity(ANI) using orhtoANI should i use only chromosomal genome or both chromosomal and plasmid together?
I'm new to the forum and working on comparative genomics.
I'm comparing around 50 bacterial genomes, most of which contain palsmid and few doesn't.
I would like to know, when i calculate average nucleotide identity(ANI) using orhtoANI should i use only chromosomal genome or both chromosomal and plasmid together?
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