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Old 02-26-2013, 07:14 PM   #1
will.jackson
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Location: Australia

Join Date: Aug 2012
Posts: 9
Default Contig coverage from ALLPATHS-LG

Hi,
I have recently done my first de novo assembly with ALLPATHS-LG. I was wondering if it was possible to determine the coverage for each of the contigs generated in the assembly? I found the overall sequence coverage statistic quite quickly but can't see any corresponding to individual contigs.

Thanks very much

Will
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allpaths-lg, contigs, coverage depth, de novo assembly

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