Tweet
I need Illumina and Ion Torrent datasets for same organism and strain for my project work. Reference genome should also be available. I searched on Ion community, NCBI, DRA search but could find only 2-3 datasets which can be used in my project. I cannot use human genome datasets as it is too large. Can someone suggest me some other websites where I can find some more real datasets. Thanks.
-
-
Look in http://www.ncbi.nlm.nih.gov/pubmed/22827831 & http://www.ncbi.nlm.nih.gov/pubmed/22522955. You should be able to find a number of E.coli K12 MG1655 datasets; that is the sample that the platforms love to use for test runs. -
Thanks a lot krobison. These papers seem to helpful. I have ecoli k12 mg1655, ecoli DH10B and plasmodium 3D7 datasets but I need more and having more varieties and these papers seem to provide such datasets.Comment
-
-
The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...04-22-2024, 07:01 AM -
Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...04-04-2024, 04:25 PM
Comment