Hi, I am using software such as cufflinks to create transcriptome assemblies. However, I have a very compact genome, and so end up with a lot of long, fused transcripts, often containing 2 or more genes.
I was wondering if there was any way to control for this or to split the genes apart again. I see a lot of software that is designed to try and find gene fusion events, but nothing to split them back apart.
I was wondering if there was any way to control for this or to split the genes apart again. I see a lot of software that is designed to try and find gene fusion events, but nothing to split them back apart.
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