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Old 08-07-2017, 12:13 PM   #1
ps25
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Default VCF output after filtering

Does anyone know of a tool that will allow me to filter an Illumina VCF file and output the results as a VCF file. All the tools I've looked at so far give the output in csv or similar file formats. Hopefully a simple to use tool for a bioinformatics beginner.
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Old 08-07-2017, 12:51 PM   #2
SNPsaurus
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vcftools takes a vcf file as input and outputs a filtered vcf file.
https://vcftools.github.io/index.html
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