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Old 04-27-2017, 07:43 PM   #1
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Location: India

Join Date: Apr 2017
Posts: 3
Exclamation MaSuRCA

Hi
I was working on RNA sequence analysis of paired end sequence reads with Tuxedo pipeline. It required an additional installation of MaSuRCA genome assembler for assembling super reads. I downloaded the latest version, MaSuRCA-3.2.2_RC1 , and gave the following command in the MaSuRCA-3.2.2_RC1 directory for its installation.

# sudo ./install.sh

Since its a long output i have pasted it in paste bin and here is the corresponding pastebin link:

https://pastebin.com/XLAT4itm

Due to the errors in between sr_config_example.txt file was not generated in MaSuRCA directory, and I couldn’t successfully run the perl command for assembling super reads. What could possibily be wrong here? Thanks in advance.

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