Hi all,
As we know that Pacbio provides CLR as well as CCS reads for error correction of the long reads for any dataset. I want to know, for Variation Detection, is it okay to ignore the CCS reads completely and simply use the .bas.h5 file as given the raw read to find variants across a reference genome?
Any help regarding this would be great..
As we know that Pacbio provides CLR as well as CCS reads for error correction of the long reads for any dataset. I want to know, for Variation Detection, is it okay to ignore the CCS reads completely and simply use the .bas.h5 file as given the raw read to find variants across a reference genome?
Any help regarding this would be great..
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