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Old 11-16-2011, 10:54 AM   #1
jkozubek
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Location: Boston University

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Default BWA No BAM Input Option?

Hi: This might be an easy question. I am using the new BWA-0.5.9 version, and there doesn't seem be a -b option for alignments to specify BAM file format as input. Does anyone know if it still handles BAM input, and perhaps I just don't need to specify an option for it, or what?
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Old 11-16-2011, 11:46 AM   #2
jkozubek
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Nevermind. i will use a different version.
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