SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
Scaffolding and assembly quality evaluation/visualisation tools? MikhailFokin Bioinformatics 2 06-04-2015 07:57 AM
CHIP Seq data analysis tutorial? dicty Bioinformatics 3 04-01-2014 06:25 PM
Guide/tutorial for the analysis of RNA-seq data MDY Bioinformatics 70 07-23-2013 12:57 AM

Reply
 
Thread Tools
Old 09-02-2015, 12:34 PM   #1
antifolate
Member
 
Location: Chesterfield, MO

Join Date: Aug 2015
Posts: 52
Default Quality Evaluation and Data Massaging Tutorial?

Hello,

I'm looking for a good source of information about evaluating the quality of raw reads (like interpreting FastQC reports) and using this information to effectively trim and and filter the data (using various trimming software). I've done this several times now and produced good results but only because I was following instructions from papers that provided the data. If there's any website or youtube video that could be help me understand this process, as a novice in this field, that would be great.

Thanks.
antifolate is offline   Reply With Quote
Old 09-02-2015, 04:22 PM   #2
dawn1313
Member
 
Location: Tucson

Join Date: Aug 2015
Posts: 21
Default

I am using FastQC now.

http://www.bioinformatics.babraham.a...ojects/fastqc/
dawn1313 is offline   Reply With Quote
Reply

Tags
fastqc, filtering, trimming

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 04:18 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO