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Old 04-18-2013, 12:26 PM   #1
Location: Cambridge

Join Date: Apr 2013
Posts: 32
Default CASIM: ChIP-Seq of broad peaks

Which is the best program to compute differential histone modifications that cover broad domains like H3K9me2, and how would one consider the inputs for all samples.
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Old 04-18-2013, 02:49 PM   #2
Wei Shi
Location: Australia

Join Date: Feb 2010
Posts: 235

Have a look at this paper:, which might be of interest to you.
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