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  • Another TopHat install problem

    I have an error when trying to configure TopHat for an install on a x86_64 linux system. The ./configure step ends with the following error:

    checking for a Python interpreter with version >= 2.4... none
    configure: error: no suitable Python interpreter found

    Although Python 2.3 was installed with the OS, multiple new versions of Python are installed at:

    /usr/local/Python-2.6.1
    /usr/local/Python-2.6.2
    /usr/local/Python-3.0

    How can I get TopHat to see these versions?

    Thanks.

  • #2
    Put them in your PATH at the beginning.

    I am a Linux newbie and this has worked for me. Other people on the forum may have more sophisticated solutions.

    Thanks,

    Shurjo

    Comment


    • #3
      One of them is already in my PATH:

      .../usr/local/psort/latest/bin:/usr/local/Python-2.6.1/:/usr/local/RAxML-latest:...

      Thanks.

      Comment


      • #4
        Try putting it at the beginning of your PATH. That forces TopHat to use that one first, even if multiple versions are installed.

        Comment

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