Go Back   SEQanswers > Regional/Local Communities > UK - Cambridge

Similar Threads
Thread Thread Starter Forum Replies Last Post
CASIM: RNA-Seq Variants Eliminating mapping bias casim UK - Cambridge 0 04-18-2013 12:33 PM
CASIM: Variants Making use of array genotype data casim UK - Cambridge 0 04-18-2013 12:32 PM
CASIM: Variants, Experimental Validation casim UK - Cambridge 0 04-18-2013 12:31 PM
CASIM: Variants Picking the best software casim UK - Cambridge 0 04-18-2013 12:30 PM
CASIM: Variants, Filtering SNP Calls casim UK - Cambridge 0 04-18-2013 12:29 PM

Thread Tools
Old 04-18-2013, 12:35 PM   #1
Location: Cambridge

Join Date: Apr 2013
Posts: 32
Default CASIM: Variants Dealing with continual addition of data

Given that it is more powerful to call genomic variants from multiple samples simultaneously than on a sample-by-sample basis, how would you deal with a situation in which samples are added incrementally (e.g. in batches) over time?

Is there a smarter, more efficient way of doing multi-sample variant calling after each increment that does not involve re-calling all variants genome-wide from scratch each time?
casim is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 06:10 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO