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Old 06-05-2014, 09:52 AM   #1
eagb
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Location: CT/PGH

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Default Genome Guided Assembly Help (TrinityRNASeq)

Hey all,

I'm trying to run a genome guided assembly w/ Trinity, and I've been having trouble getting it started. Here's the script I'm running: https://gist.github.com/ethanabaker1...11c1afb77485f7

Here's the error I keep getting: https://gist.github.com/ethanabaker1...a1e46d0039b4b2

Anyone know what's going on here? I've used the model in the documentation exactly.... Wondering if this is a product of the reference genome size.
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