Hi all,
I have hundreds of .sra files of a genome re-sequencing project which I downloaded from the NCBI sequence read archive. Does anyone know a quick way of converting them into fastq files? With the SRA toolkit it seems to work with only one file at the time:
../bin64/fastq-dump -A <SRR_accession> -D <Path_to_SRR_Directory> -O <Output_Path>
Many thanks for your suggestions!
I have hundreds of .sra files of a genome re-sequencing project which I downloaded from the NCBI sequence read archive. Does anyone know a quick way of converting them into fastq files? With the SRA toolkit it seems to work with only one file at the time:
../bin64/fastq-dump -A <SRR_accession> -D <Path_to_SRR_Directory> -O <Output_Path>
Many thanks for your suggestions!
Comment