Hi all,
Is there a way to quickly extract out the coordinates from a gff2 file and the corresponding sequence from a fasta file? Actually I predicted CDS using 3 different softwares and then generated consensus gene model by Evigan. Now I am trying to get CDS sequences from the reference fasta file using this Evigan generated gff.
Many thanks,
Rahul
Is there a way to quickly extract out the coordinates from a gff2 file and the corresponding sequence from a fasta file? Actually I predicted CDS using 3 different softwares and then generated consensus gene model by Evigan. Now I am trying to get CDS sequences from the reference fasta file using this Evigan generated gff.
Many thanks,
Rahul
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