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  • New transcript?

    Hi!
    We have measured a protein, but we get a much larger protein than the transcript should imply.

    Using RNA-seq I assembled some transcript using Cufflinks->Cuffmerge to look for a new transcript. I have only ran a few of all samples.

    I did not find anything obvious, but a "wired thing" upstream of the gene:

    Click image for larger version

Name:	Screen Shot 2014-08-18 at 16.23.56.jpg
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    Sorry for hiding the gene name, I don't know if its "secret" or not...

    Question is, how should I presceed?

  • #2
    Hi Sindrle,

    Can you please give more details on how you measured the protein and also what are you referring to as a "wired thing" in the picture that you attached.

    Priya

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