Hi dear,
I am going to deal with my big DNA-reseq data by bowtie2! I have finished index buliding , now I am preparing for mapping. But there're so many arguments to adjust! can I just use all the default ? but it seems not good.
Can anybody tell me a complete solution or a paper about bowtie2-mapping pipeline? please Add your detail reasons for every argument, that is best!
I am going to deal with my big DNA-reseq data by bowtie2! I have finished index buliding , now I am preparing for mapping. But there're so many arguments to adjust! can I just use all the default ? but it seems not good.
Can anybody tell me a complete solution or a paper about bowtie2-mapping pipeline? please Add your detail reasons for every argument, that is best!
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