I'm trying to convert vcf files to ped files, but I get a weird error.
I execute:
And I get the following error:
Has anyone ever seen this error? How can I convert my file to ped format?
I execute:
Code:
vcftools --gzvcf chr23.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.EUR.nosingles.vcf.gz --chr X --plink --out chr23
Code:
Using zlib version: 1.2.3 Versions of zlib >= 1.2.4 will be *much* faster when reading zipped VCF files. Reading Index file. File contains 406938 entries and 379 individuals. Filtering by chromosome. terminate called after throwing an instance of 'std::bad_alloc' what(): St9bad_alloc Aborted