Hi,
I have a sequence generated from an assembler which shows 95% identity to a nucleotide sequence when I BLAST or blastx it. But there is no similarity at protein level (blastp). Also, the translated sequence has multiple asterisks (*) , which means stop codons. If its at the end it means the end of the sequence, what does it mean when there are many of them?
I would like to do a homology model of the sequence. Any suggestions how to go ahead.
Any help is very much appreciated.
Thank you
I have a sequence generated from an assembler which shows 95% identity to a nucleotide sequence when I BLAST or blastx it. But there is no similarity at protein level (blastp). Also, the translated sequence has multiple asterisks (*) , which means stop codons. If its at the end it means the end of the sequence, what does it mean when there are many of them?
I would like to do a homology model of the sequence. Any suggestions how to go ahead.
Any help is very much appreciated.
Thank you
Comment