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Old 08-06-2009, 10:59 AM   #1
baohua100
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Location: Canada

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Default maq map -H file

maq map -H

-H FILE dump multiple/all 01-mismatch hits to FILE [null]

But I could not open the output file maybe it's binary ?
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Old 08-07-2009, 08:06 AM   #2
jnfass
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yes - it's gzipped ...
(it really should say this on the man page, shouldn't it?)
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