Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
No output from samtool's mpileup mikheyev Bioinformatics 6 03-18-2014 05:58 AM
varscan2 mpileup2snp output differs from mpileup output JohanF Bioinformatics 0 02-28-2014 01:47 AM
Mpileup output bfantinatti Bioinformatics 7 11-07-2012 02:42 AM
Help! about Samtools mpileup output wzhangvv Bioinformatics 0 10-08-2012 08:56 AM

Thread Tools
Old 03-11-2019, 08:02 PM   #1
Junior Member
Location: murica

Join Date: Mar 2019
Posts: 1
Default mpileup output

Hi, I'm just wondering why the genomic position skips from 6925 to 6957 in the mpileup output. Is it just a way to compress the file and not rewrite the exact same output again? Therefore, can I assume from 6925 to 6956 the number of reads covering the site is the same as that at 6925?

Last edited by bobjoe; 03-11-2019 at 08:47 PM.
bobjoe is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 05:55 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO