Hi all,
I was wondering if anyone has any particular advice regarding indel calling from a paired-end illumina dataset consisting a pool of gDNA from 20 individuals from a population.
I've been playing around with VarScan but would like to try a few other methods. Does anyone have any experience with Dindel or any other software?
Thank
I was wondering if anyone has any particular advice regarding indel calling from a paired-end illumina dataset consisting a pool of gDNA from 20 individuals from a population.
I've been playing around with VarScan but would like to try a few other methods. Does anyone have any experience with Dindel or any other software?
Thank
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