Hi,
I just started in a lab that is now interested in doing NGS analysis of samples (RNA-seq, ChIP-seq and DNA-seq). Unfortunately nobody in the lab (or on campus) has done much NGS before so I'm kinda left to myself, and my boss wants me to learn (pretty much from scratch).
I was wondering if you knew of any good, comprehensive resource for beginners, including programming and where to download info from databases and how to handle these big files and such. I don't really have any programming background, but I am a very fast learner. I just need someone to show me the ropes of things. I have a dataset that was produced by someone else but never analyzed, and it's sitting there ready to be handled, but I don't even know where to start. Not sure if it matters, but it was generated on an Illumina machine.
Any help would be greatly appreciated.
Thanks
I just started in a lab that is now interested in doing NGS analysis of samples (RNA-seq, ChIP-seq and DNA-seq). Unfortunately nobody in the lab (or on campus) has done much NGS before so I'm kinda left to myself, and my boss wants me to learn (pretty much from scratch).
I was wondering if you knew of any good, comprehensive resource for beginners, including programming and where to download info from databases and how to handle these big files and such. I don't really have any programming background, but I am a very fast learner. I just need someone to show me the ropes of things. I have a dataset that was produced by someone else but never analyzed, and it's sitting there ready to be handled, but I don't even know where to start. Not sure if it matters, but it was generated on an Illumina machine.
Any help would be greatly appreciated.
Thanks
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