Hi, All,
I'm a new PhD student in this field, and new here. I found many amazing stuffs in this Forum.
Now, I'm involving into a project which require me to find the TF binding in a set of DNA region.
What I know are the DNA regions' location and sequence, the length of them are around several kb to 100 kb.
Is there a tool to find the enrichment TF binding motifs in these region? As I know, the MEME and DME are designed for chip-seq data whose length is about only several hundred bp, so can these tools be used for my purpose?
Thanks
I'm a new PhD student in this field, and new here. I found many amazing stuffs in this Forum.
Now, I'm involving into a project which require me to find the TF binding in a set of DNA region.
What I know are the DNA regions' location and sequence, the length of them are around several kb to 100 kb.
Is there a tool to find the enrichment TF binding motifs in these region? As I know, the MEME and DME are designed for chip-seq data whose length is about only several hundred bp, so can these tools be used for my purpose?
Thanks
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