We have used the SMRT(Pacific Biosciences) sequencing system PacBio RS II to generate cDNA sequences. After isoform-level clustering, polishing and trimming of raw data, non-redundant contigs were obtained. Next we want to do the Fragment analysis( microsatellite or SSR/STR), So is there any tools or workflow now available for the microsatellite or SSR/STR analysis?
Thanks a lot for any apply
Thanks a lot for any apply
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