Hi,
When running `samtools mpileup` with no parameters , it says that mpileup assumes diploid individuals. I'm working with haploid samples - does that mean I have to find a different SNP / Indel caller? Or is there a way to specify haploid samples?
Thanks.
When running `samtools mpileup` with no parameters , it says that mpileup assumes diploid individuals. I'm working with haploid samples - does that mean I have to find a different SNP / Indel caller? Or is there a way to specify haploid samples?
Thanks.
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