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Old 08-02-2018, 12:28 AM   #1
jop
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Location: Athens, Greece

Join Date: Aug 2018
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Post how to represent my ngs results

Hello!

I am a new member of your fantastic society and I am also making my first attempt on next generation sequencing.

I am working on a project with rats and the different populations that their microbiome consists of...

So, I have my results in an excel sheet and I have to make a heatmap.

My question is a basic one: how do I generate a heatmap? Do I need to make formulations on the results? Do I need something else apart from excel?

Thank you in advance- Keep sciencing!
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Old 08-02-2018, 04:30 PM   #2
luc
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What type of results do you have at the moment?

I am sure there will be a way to generate heatmaps in Excel.

It will certainly better in the long run to become familiar with R/RStudio and the appropriate scripts and statistics. I can't tell you which, I do not analyze this type of data myself.
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Old 08-02-2018, 11:52 PM   #3
jop
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My results are in an excel sheet and the have for each sample a percentage for a specific type of bacteria.
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