Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
Collapse
 
  • Page of 1
  • Filter
  • Time
  • Show
Clear All
new posts
Previous template Next
  • #1

    VCF index creation doesn't finish

    I have encountered the following problem several times. When running GATK RealignerTargetCreator, the program attempts to create the indices for the input VCFs.

    With some of my VCFs, the index creation seems to run actively (CPU usage 100%) for a very long time (5 days before I killed the process) even though normally the tribble index creation takes only <30 minutes. Could this be a bug in the program? Have you come up with a similar problem?

    Yilong
    Tags: None
Previous template Next

Latest Articles

Collapse
  • seqadmin
    Recent Advances in Sequencing Analysis Tools
    by seqadmin


    The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
    05-06-2024, 07:48 AM
  • seqadmin
    Essential Discoveries and Tools in Epitranscriptomics
    by seqadmin




    The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
    04-22-2024, 07:01 AM
View All

ad_right_rmr

Collapse

News

Collapse
Topics Statistics Last Post
A Closer Look at the Enigmatic Genomes of Oikopleura dioica by seqadmin
Started by seqadmin, Today, 06:35 AM
0 responses
12 views
0 likes
 Last Post seqadmin
by seqadmin
Today, 06:35 AM  
Advanced Epigenome Editing Platform Explores Gene Regulation Mechanisms by seqadmin
Started by seqadmin, Yesterday, 02:46 PM
0 responses
18 views
0 likes
 Last Post seqadmin
by seqadmin
Yesterday, 02:46 PM  
Telomere Maintenance by PARP1: A New Perspective in Cancer Research by seqadmin
Started by seqadmin, 05-07-2024, 06:57 AM
0 responses
17 views
0 likes
 Last Post seqadmin
by seqadmin
05-07-2024, 06:57 AM  
Enhanced Neoantigen Detection: Introducing NeoHunter by seqadmin
Started by seqadmin, 05-06-2024, 07:17 AM
0 responses
19 views
0 likes
 Last Post seqadmin
by seqadmin
05-06-2024, 07:17 AM  
View All
Working...
X