Dear Seqanswers,
Recently my lab purchased a license for CLC genome workbench to use for our next-gen sequencing needs. We have been using Bowtie/SAM Tools but everyone else liked the ease of use of this software. Does anyone have experience using both of these pieces of software and can you tell me how accurate they may be? Obviously CLC wins in terms of presentation hands down, but from what I have read Bowtie is not only faster, but also more accurate. Any feedback will be greatly appreciated.
Cheers,
Recently my lab purchased a license for CLC genome workbench to use for our next-gen sequencing needs. We have been using Bowtie/SAM Tools but everyone else liked the ease of use of this software. Does anyone have experience using both of these pieces of software and can you tell me how accurate they may be? Obviously CLC wins in terms of presentation hands down, but from what I have read Bowtie is not only faster, but also more accurate. Any feedback will be greatly appreciated.
Cheers,
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