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Have you looked at the text here: https://github.com/chrisamiller/read...n/readDepth.Rd
If that is not detailed enough you should email the author directly for additional help: https://github.com/chrisamiller
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Originally posted by GenoMax View PostHave you looked at the text here: https://github.com/chrisamiller/read...n/readDepth.Rd
If that is not detailed enough you should email the author directly for additional help: https://github.com/chrisamiller
Yes, i saw this already and it's not detailed enough, at least for me..
I sent email to the author and waiting for his response..
I was sure that every package in R must have vignette/ or at least simple manual..
Thanks,
Pap
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How about genomecov (http://bedtools.readthedocs.org/en/l...genomecov.html) or coveragebed (http://bedtools.readthedocs.org/en/l...overage.html)? Those should work for what you are trying to do.
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Originally posted by GenoMax View PostHow about genomecov (http://bedtools.readthedocs.org/en/l...genomecov.html) or coveragebed (http://bedtools.readthedocs.org/en/l...overage.html)? Those should work for what you are trying to do.
Thanks!! I like bedtools!
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