Hi:
Im having problems with the seqVCF2GDS function; when I try to convert my vcf file to gds format:
> seqVCF2GDS("myfile.vcf","myfile.gds",verbose=TRUE)
I get this:
The Variant Call Format (VCF) header:
file format: VCFv4.1
the number of sets of chromosomes (ploidy): 2
Parsing "myfile.vcf" ...
Error en put.attr.gdsn(varFilter, "R.levels", v) :
The length of values should be > 0.
I don't understand this error
please help!
thanks!
Im having problems with the seqVCF2GDS function; when I try to convert my vcf file to gds format:
> seqVCF2GDS("myfile.vcf","myfile.gds",verbose=TRUE)
I get this:
The Variant Call Format (VCF) header:
file format: VCFv4.1
the number of sets of chromosomes (ploidy): 2
Parsing "myfile.vcf" ...
Error en put.attr.gdsn(varFilter, "R.levels", v) :
The length of values should be > 0.
I don't understand this error
please help!
thanks!