Hi,
I'm very new at all this and I thought this was a good way of finding some anwers
I'm comparing tools for NGS data and I'm working with SOAPdenovo right now.
I got the output files, but I have no idea how I can find or calculate the statistics of the assembly (such as number of contigs, N50, genome coverage, etc.)
Does anybody know if there is a script for finding those stats, or just where I would be able to find these?
Thank you very much in advance!
Jolien
I'm very new at all this and I thought this was a good way of finding some anwers
I'm comparing tools for NGS data and I'm working with SOAPdenovo right now.
I got the output files, but I have no idea how I can find or calculate the statistics of the assembly (such as number of contigs, N50, genome coverage, etc.)
Does anybody know if there is a script for finding those stats, or just where I would be able to find these?
Thank you very much in advance!
Jolien
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