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Old 05-30-2011, 08:43 AM   #1
abrook
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Location: Toronto

Join Date: May 2011
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Default Entrez to Refseq programmatic conversion

Hi,

I have seen similar threads on this and other forums but they failed to solve my problem.

I would like to convert Entrez gene ids to Refseq (or maybe something else) within a Java program. I have been looking for web services to do this but they all seem to be for manual entry and retrieval of data.

What I really need is to retrieve the location (start and end position) of a gene, given its Entrez ID.

Any help would be appreciated.

Thanks,
Andrew
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Old 05-30-2011, 10:42 AM   #2
DZhang
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Hi Andrew,

Check this out: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2561161/

I hope it helps you out!

Douglas
www.contigexpress.com
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