I am doing some experiment with BowTie 1. Now, I want to give BowTie the whole human genomic database as input. However, I have 22 chromosomal sequence database (non sex related) of forward strand. Can anyone help me, is concatenation of those 22 databases is same to whole genomic sequence or not. Means, is CAT 22 chromosomal sequence database == Whole Genomic Sequence database (non sex related) or not.
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Originally posted by chadn737 View PostWhy not just use the prebuilt human indexes for Bowtie?
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