Hi
I am trying to use HISAT2 (https://ccb.jhu.edu/software/hisat2/index.shtml) to do alignments and downstram processing.
The problem that I encounter is that I am not able to get a hisat executable file after running the
command (I am on Ubuntu 16.04).
Running
on the downloaded binary (or the source) file gives me all the other required executables (hisat2-align-s, hisat2-align-l, hisat2-build, hisat2-build-s, hisat2-build-l, hisat2-inspect, hisat2-inspect-s and hisat2-inspect-l) but not hisat2 which is required in the alignment step.
May be I am just missing some small point here but any help will be great.
Thanks.
Dros
I am trying to use HISAT2 (https://ccb.jhu.edu/software/hisat2/index.shtml) to do alignments and downstram processing.
The problem that I encounter is that I am not able to get a hisat executable file after running the
Code:
make
Running
Code:
make
May be I am just missing some small point here but any help will be great.
Thanks.
Dros
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